PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462910861

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

BES1

Protein Properties

Length: 123aa MW: 13274.7 Da PI: 9.616

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462910861	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	150.1	1.7e-46	27	95	5	73
DUF822 5 rkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgs 73 r p+w+ErEnn+ RERrRRaiaaki+ GLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrk++ 462910861 27 RVPSWRERENNRNRERRRRAIAAKIFGGLRAYGNYRLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKHC 95 89*****************************************************************97 PP
2	DUF822	60.4	7.5e-19	92	121	42	71
DUF822 42 pkraDnneVlkALcreAGwvvedDGttyrk 71 +k++DnneVlkALc+eAGw+ve+DGttyrk 462910861 92 RKHCDNNEVLKALCNEAGWTVEPDGTTYRK 121 79***************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.1E-43	27	93	IPR008540	BES1/BZR1 plant transcription factor, N-terminal
Pfam	PF05687	2.8E-17	92	121	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 123 aa Download sequence Send to blast
MNGVGGGGAA GAGAGGNGGG GGSWPVRVPS WRERENNRNR ERRRRAIAAK IFGGLRAYGN 60 YRLPKHCDNN EVLKALCNEA GWTVEPDGTT YRKHCDNNEV LKALCNEAGW TVEPDGTTYR 120 KVS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-22	27	95	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-22	27	95	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-22	27	95	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-22	27	95	372	440	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462910861

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK101229	4e-68	AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence.
GenBank	AP003682	4e-68	AP003682.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0427B07.
GenBank	AP003686	4e-68	AP003686.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0659D09.
GenBank	AP014962	4e-68	AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.
GenBank	CP012614	4e-68	CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010675300.1	3e-40	PREDICTED: BES1/BZR1 homolog protein 4
Swissprot	Q6EUF1	4e-30	BZR4_ORYSJ; Protein BZR1 homolog 4
TrEMBL	A0A4D8Z6E1	1e-36	A0A4D8Z6E1_SALSN; Uncharacterized protein
STRING	XP_010675300.1	1e-39	(Beta vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	4e-25	BES1 family protein