PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462911439
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 191aa    MW: 21380.5 Da    PI: 5.2586
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462911439genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like67.62e-213288255
    G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmk...vkgLtlehvkSHLQkYRl 55
               +r+ Wt +LH+ Fv+av+  GG++ A P +++++m+   v +Lt++++kSHLQkYR 
  462911439 32 KRMLWTDNLHKIFVKAVAYHGGPHAAKPNAVKQTMEaigVTSLTMHNIKSHLQKYRH 88
               79**************************99988775333889**************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466899.14E-132889IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.2E-203089IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-173288IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MSNNKSSQYS VASYMSRILD PRMIRAMQPT RKRMLWTDNL HKIFVKAVAY HGGPHAAKPN  60
AVKQTMEAIG VTSLTMHNIK SHLQKYRHME KCGLGAGAAD NVPGTTSASK ADLMSEMMVD  120
TDAVMAEIEV VTQVNRFLMD DVEMVENNFS VDELQTMEEE LMAEVQLIQL NSQIPQTAVD  180
EYMDGLANYS M
Cis-element ? help Back to Top
SourceLink
PlantRegMap462911439
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015628276.12e-68myb family transcription factor PHL12-like isoform X3
RefseqXP_015628277.12e-68myb family transcription factor PHL12-like isoform X3
TrEMBLB8ANJ65e-67B8ANJ6_ORYSI; Uncharacterized protein
TrEMBLB9FA355e-67B9FA35_ORYSJ; Uncharacterized protein
STRINGORGLA03G0258500.12e-61(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP154991216
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G06020.13e-14G2-like family protein