PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462915071
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 220aa    MW: 23974.2 Da    PI: 10.7275
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462915071genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.13.4e-12131170541
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                k  rr+++NReAAr+sR+RKka+i++Le+   + ++Le+e
  462915071 131 KTLRRLAQNREAARKSRLRKKAYIQQLETgriRLAQLEQE 170
                7789***********************9644467777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-4127180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-9127175No hitNo description
PROSITE profilePS502178.565129158IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-7131163No hitNo description
PfamPF001701.2E-9131172IPR004827Basic-leucine zipper domain
PROSITE patternPS000360134149IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MAYPSTSGMI QASSSHHGGT MRRDPEGYDM PSDLDQAVLL YFDGHQAKPS IQEQPQTLNI  60
FPSQPMHVEP SPKGSMTSAA VAQVAGSSKP VKAAGGQFSA GKSSKPALKR EGGGAAASSS  120
DQEGPRRPDP KTLRRLAQNR EAARKSRLRK KAYIQQLETG RIRLAQLEQE VQMARTQGAL  180
WGTGALSPGI TCHIKFISFF ITWLAVHRRD HQLTMCTHVR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462915071
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0550429e-58BT055042.1 Zea mays full-length cDNA clone ZM_BFc0123E11 mRNA, complete cds.
GenBankKJ7276049e-58KJ727604.1 Zea mays clone pUT5464 bZIP transcription factor (bZIP70) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004965885.15e-90transcription factor TGAL8 isoform X1
SwissprotQ69T216e-71TGAL8_ORYSJ; Transcription factor TGAL8
TrEMBLA0A2S3HHY14e-89A0A2S3HHY1_9POAL; Uncharacterized protein
TrEMBLK3XWV91e-88K3XWV9_SETIT; Uncharacterized protein
STRINGSi006417m2e-89(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP129722126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.33e-43bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]