PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462916456
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family WRKY
Protein Properties Length: 126aa    MW: 13405.2 Da    PI: 8.7453
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462916456genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY31.82.8e-1099119222
                --SS-EEEEEEE--TT-SS-E CS
       WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                dDg++WrKYGqK++ g++fpr
  462916456  99 DDGFSWRKYGQKDILGAKFPR 119
                8*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.5E-890119IPR003657WRKY domain
PROSITE profilePS508119.40893119IPR003657WRKY domain
SuperFamilySSF1182901.18E-797120IPR003657WRKY domain
SMARTSM007744.6E-498125IPR003657WRKY domain
PfamPF031063.7E-799120IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    Send to blast
MQDGSAGGGD GGINLLLSIL ADGEEQARLL GELPDDPRLG AERYRGAARM LQCTLGKAVT  60
VAKAIEAAAS RAADSPRKGL PRWTAKFRVP DANLEATPDD GFSWRKYGQK DILGAKFPRV  120
SSCPIH
Cis-element ? help Back to Top
SourceLink
PlantRegMap462916456
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004964792.15e-47uncharacterized protein LOC101764723
RefseqXP_022681387.15e-47uncharacterized protein LOC101764723
TrEMBLA0A1E5W0A17e-47A0A1E5W0A1_9POAL; Putative WRKY transcription factor 53
STRINGSi008812m2e-46(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133402730
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.12e-16WRKY DNA-binding protein 30