PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462919689
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 214aa    MW: 23925.7 Da    PI: 6.9086
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462919689genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.95.8e-08127102128
        NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                ++  Lvfy+gr p+ +ktdW++heyrl
  462919689   1 MRCPLVFYRGRPPTRTKTDWMIHEYRL 27 
                5778*********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100517.814151IPR003441NAC domain
SuperFamilySSF1019416.02E-11151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MRCPLVFYRG RPPTRTKTDW MIHEYRLAGA RLVPGRRAEA EGWLLCRVFL KPGSTISEEE  60
QEAVQDEEEE EAVAKDSERR TLFRHPPAAT GAGAKYRLSG ARLVPGRRAE AEGWLLCRVF  120
LKPGSTISEE EQEAVQDEEE EEAVAKDSER RTLFRHPRTS TSSRSRMRRS SSNGSRSATP  180
EEADQGGHGQ GVISFAGIIC SAIESVCSCN LQFR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462919689
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.16e-13vascular related NAC-domain protein 7