PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462920631

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 160aa MW: 18190.7 Da PI: 10.3634

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462920631	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	6.7e-16	90	139	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + +el+k+ 462920631 90 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLK-RQKELEKM 139 79***************************************9.88888887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.8E-15	84	138	No hit	No description
SMART	SM00338	7.6E-11	86	154	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.702	88	133	IPR004827	Basic-leucine zipper domain
CDD	cd14707	2.57E-23	90	144	No hit	No description
SuperFamily	SSF57959	1.44E-11	90	135	No hit	No description
Pfam	PF00170	2.8E-13	90	138	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	93	108	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 160 aa Download sequence Send to blast
MTRGAQWLDP YQQQFTAIDP HQHVQQSMPV AYMPSRLALQ PLNVGPCAIM EPAYSDGNNT 60 SPMMGALSDS PTPGRKRGAS GDVADKLMER RQKRMIKNRE SAARSRARKQ AYTNELENKV 120 SRLEEENERL KRQKELEKML FSAPLPEPKY QLRRTGSAAF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462920631

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004970325.1	1e-94	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_022682969.1	1e-94	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-44	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	A0A0A9HCS1	5e-96	A0A0A9HCS1_ARUDO; Uncharacterized protein
STRING	Si002173m	4e-94	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	7e-47	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]