PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462922922
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 334aa    MW: 35071.8 Da    PI: 8.6401
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462922922genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_177.61.5e-24188250163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                e+elkrerrkq+NRe+ArrsR+RK++e+eeL +kv+eL++eN+aL+ el++lkk ++ ++ e+
  462922922 188 ERELKRERRKQSNRESARRSRLRKQQECEELGRKVAELTTENSALRAELDNLKKACQDMEVEN 250
                89********************************************************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165969.8E-1058166No hitNo description
Gene3DG3DSA:1.20.5.1703.0E-18185246No hitNo description
PfamPF001701.4E-21188250IPR004827Basic-leucine zipper domain
SMARTSM003381.1E-21188252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.001190253IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-11191245No hitNo description
CDDcd147022.35E-20193244No hitNo description
PROSITE patternPS000360195210IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MAAAVSTPDS SPTSRIGENW VSICGVLGLN LLPLLLCAAA AAEGKGKGKG GGASPEKGSS  60
GAASGEDASR SGDSGSDESS DTRDDDTDHK DSSAPKKRKS GNTSAEGEPS QAVVRYAAVE  120
SPFPVKGRSA SKLPVSAPGR AALPHATPNL NIGMDLWSAS PALAVPAVQG EASPGLALAR  180
RDGGPLDERE LKRERRKQSN RESARRSRLR KQQECEELGR KVAELTTENS ALRAELDNLK  240
KACQDMEVEN SRLLGGMVHS QGPSVTTTLG MSVEAPKAQQ HDDEGQLRKN TNNNSNGNYV  300
GGSHKQEANT RVLVQAAWAR QQQASVIGRL GHWA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1204210RRSRLRK
2204211RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462922922
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004955801.11e-152DNA-binding protein EMBP-1
SwissprotP250328e-55EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A368PYJ71e-152A0A368PYJ7_SETIT; Uncharacterized protein
TrEMBLA0A3L6T6W41e-151A0A3L6T6W4_PANMI; DNA-binding protein EMBP-1-like
TrEMBLK3ZU421e-151K3ZU42_SETIT; Uncharacterized protein
STRINGPavir.Ba03287.1.p1e-155(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.13e-23basic region/leucine zipper transcription factor 16