PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462923109
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bHLH
Protein Properties Length: 101aa    MW: 10953.2 Da    PI: 7.3643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462923109genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.5e-0727681454
               HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
        HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
               d+i + +++L+ llP+ ++ ++ ++ s a +L+ ++ YI+sL
  462923109 27 DQISELLSKLQALLPEsQTLNGTQRGSAARVLQDTCSYIRSL 68
               6899************777888899***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.3621368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.5E-82772IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-42768IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-82786IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0009826Biological Processunidimensional cell growth
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    Send to blast
MSSSRRSRPR RAGSSLSSSS SRTISEDQIS ELLSKLQALL PESQTLNGTQ RGSAARVLQD  60
TCSYIRSLHQ EVDNLSETLA ELLSSADVTS DQAAIIRSLL M
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462923109
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0965987e-94FP096598.1 Phyllostachys edulis cDNA clone: bphyst010g20, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025825700.11e-43transcription factor ILI1
SwissprotA2XY476e-41ILI1_ORYSI; Transcription factor ILI1
SwissprotQ7X7426e-41ILI1_ORYSJ; Transcription factor ILI1
TrEMBLA0A2S3IAW32e-42A0A2S3IAW3_9POAL; Uncharacterized protein
TrEMBLA0A2T7D0T12e-42A0A2T7D0T1_9POAL; Uncharacterized protein
TrEMBLA0A3L6Q1252e-42A0A3L6Q125_PANMI; Uncharacterized protein
STRINGPavir.Ga00332.1.p4e-43(Panicum virgatum)
STRINGPavir.J06936.1.p4e-43(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122932837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74500.14e-18activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1