PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462923865
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 439aa    MW: 50072.9 Da    PI: 10.0884
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462923865genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM114.51.1e-35431851128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tksgy 82 
                lp+G++F+Ptd+el+ e+L++kv+++       +++  +i+++d    i++++P++Lp  v+ +  + +fF++ +k+y+tg+rk+r+          + +
  462923865  43 LPAGVKFDPTDQELI-EHLEAKVKEEGsrshplIDE--FIPTIDgedgICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqtecdvqKGETR 138
                799************.99******999677544333..3444433445**********.555666799******************75666664433778 PP

        NAM  83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                W++tgk+++v++ +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  462923865 139 WHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 185
                ************.999***********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3937204IPR003441NAC domain
PROSITE profilePS5100534.28843204IPR003441NAC domain
PfamPF023652.7E-1644185IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MNRGHISSSK LINEKLEEHQ ISTAKHCPNC HHKIDSKPDW VGLPAGVKFD PTDQELIEHL  60
EAKVKEEGSR SHPLIDEFIP TIDGEDGICY THPEKLPGVT RDGLSKHFFH RPSKAYTTGT  120
RKRRKIQTEC DVQKGETRWH KTGKTRPVMV NGRQKGCKKI LVLYTNFGKH RKPEKTNWVM  180
HQYHLGDLEE EKEGELVVCK IFYQTQPRQC SWSSDRGAAA VGIGGDQVPP DQLRRSDQQH  240
HAGQEQQPHR PVLATTAVPA TAFLISRPSN PVSTIVPPAM QHASVVLDHD QFHVPAILLH  300
HHDKFQHQHQ HQSQHQQPQQ KLDRRSAGLE ELIMGCTSST SAKGDRKLHV VMQASTHANK  360
IERERERAMY TVLLLPREKK HHEYMQTRTT LCFAFERQRR AQRPTKLQLR SPKRQNGLTS  420
TGHLTTKIIM GSSNKAAML
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-134118513140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462923865
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0686010.0BT068601.1 Zea mays full-length cDNA clone ZM_BFb0363G10 mRNA, complete cds.
GenBankBT0865770.0BT086577.1 Zea mays full-length cDNA clone ZM_BFc0185G06 mRNA, complete cds.
GenBankEU9747770.0EU974777.1 Zea mays clone 457960 ANAC075 mRNA, complete cds.
GenBankJX4699050.0JX469905.1 Zea mays subsp. mays clone UT3145 NAC-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020190512.10.0uncharacterized protein LOC109776267 isoform X2
TrEMBLA0A453E6490.0A0A453E649_AEGTS; Uncharacterized protein
STRINGEMT270680.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145338117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.11e-118NAC domain containing protein 75