PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462929130
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family NAC
Protein Properties Length: 190aa    MW: 21772.3 Da    PI: 10.2126
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462929130genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.27.8e-5411281128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgel 99 
                + pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLpk ++++ekewyf+++rd+ky++++r+nr+t +g+Wkatg+d++++s+ +++ 
  462929130   1 MLPGFRFHPTDEELVRFYLKRKIQQKSLPI-ELIRQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSTRPNRVTGAGFWKATGTDRPIYSSdGSKC 99 
                579***************************.89***************9888999***************************************966677 PP

        NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                +glkk+Lvfykgra kg+ktdW+mhe+rl
  462929130 100 IGLKKSLVFYKGRAAKGVKTDWMMHEFRL 128
                ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100552.2211153IPR003441NAC domain
SuperFamilySSF1019417.59E-562133IPR003441NAC domain
PfamPF023651.9E-263128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MLPGFRFHPT DEELVRFYLK RKIQQKSLPI ELIRQLDIYK YDPWDLPKLA STGEKEWYFY  60
CPRDRKYRNS TRPNRVTGAG FWKATGTDRP IYSSDGSKCI GLKKSLVFYK GRAAKGVKTD  120
WMMHEFRLPS LTDPSVPQKK PLEKTIPPNV IQELLSHIAP ALVLASRLPG SPVSGSDMSG  180
HAMLEFCVVR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-52312817140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462929130
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1964721e-111AC196472.3 Zea mays BAC clone ZMMBBb-235B12 from chromosome 5, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002454285.11e-107putative NAC domain-containing protein 94
SwissprotQ9FIW51e-85NAC94_ARATH; Putative NAC domain-containing protein 94
TrEMBLA0A287UQU31e-106A0A287UQU3_HORVV; Uncharacterized protein
STRINGOS02T0745250-001e-107(Oryza sativa)
STRINGSb04g028015.11e-107(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33663882
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39820.16e-88NAC domain containing protein 94