PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462932103

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

Dof

Protein Properties

Length: 534aa MW: 56746.5 Da PI: 8.383

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462932103	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	112.6	1.8e-35	105	163	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+l+cprC+s+ tkfCy+nny+++qPr++Ck+C+ryWt+GG++rnvP+G+grr++k+ 462932103 105 PDKILPCPRCNSMVTKFCYFNNYNVKQPRHYCKECKRYWTAGGTMRNVPIGSGRRRKKN 163 7899****************************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-27	91	162	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.3E-30	107	163	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.335	109	163	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	111	147	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 534 aa Download sequence Send to blast
MDAPGDPAEP AIKLFGRTIA LSDSTGAAPE VSTKLADDVR SNSGTPCIPK KILNGKSNSF 60 CSKTSSLNGI QAISSQSRQM ETDLKPEEVK TESDGSGQEK EVKKPDKILP CPRCNSMVTK 120 FCYFNNYNVK QPRHYCKECK RYWTAGGTMR NVPIGSGRRR KKNPYQHHAM MSCDENVSNG 180 DASDATDQQS LPVEPCVLQR PVKLNERVTT SGSEVSLCKK TQVPNTKEQN NSLGSVDNKE 240 EKSCATSSTV SGCSENWVPE NTVTKGQNDG LGNGNGVKET HPHNQSNPAG LALVVPRSPG 300 WNNVADMAST QCSTESIHGL GNGTASKVSL PPPQTIPAPG LSAPAQSNPA GHALVVPRSP 360 GWNNVADMGS TQCSTESIDG LGNGMASKVS LPPPQITPAP GLSAPAVPFP LGPPLWSCIA 420 GWPNGMWSSP RPGSNGSTLP SPPKLGKHSR EETLQGEENK GNKIWVPKAL RITDPEEAAK 480 SSILASLGIK PDEKGIFKSF QSKVLEDGKT PEAHQAQQAN PAAVSRSQSF QERT

Sequence ? help Back to Top

Protein Sequence Length: 534 aa Download sequence Send to blast

MDAPGDPAEP AIKLFGRTIA LSDSTGAAPE VSTKLADDVR SNSGTPCIPK KILNGKSNSF  60
CSKTSSLNGI QAISSQSRQM ETDLKPEEVK TESDGSGQEK EVKKPDKILP CPRCNSMVTK  120
FCYFNNYNVK QPRHYCKECK RYWTAGGTMR NVPIGSGRRR KKNPYQHHAM MSCDENVSNG  180
DASDATDQQS LPVEPCVLQR PVKLNERVTT SGSEVSLCKK TQVPNTKEQN NSLGSVDNKE  240
EKSCATSSTV SGCSENWVPE NTVTKGQNDG LGNGNGVKET HPHNQSNPAG LALVVPRSPG  300
WNNVADMAST QCSTESIHGL GNGTASKVSL PPPQTIPAPG LSAPAQSNPA GHALVVPRSP  360
GWNNVADMGS TQCSTESIDG LGNGMASKVS LPPPQITPAP GLSAPAVPFP LGPPLWSCIA  420
GWPNGMWSSP RPGSNGSTLP SPPKLGKHSR EETLQGEENK GNKIWVPKAL RITDPEEAAK  480
SSILASLGIK PDEKGIFKSF QSKVLEDGKT PEAHQAQQAN PAAVSRSQSF QERT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462932103

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020191388.1	1e-152	cyclic dof factor 3-like
TrEMBL	A0A1D8RJ11	0.0	A0A1D8RJ11_ELECO; DNA-binding with one finger protein 14 (Fragment)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1434	38	116

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	7e-38	cycling DOF factor 2