PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462945405
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 354aa    MW: 38284.1 Da    PI: 9.1029
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462945405genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.61.2e-22215277163
                XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L++e+++l++ ++kl++e+
  462945405 215 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRSEINKLTESSQKLRMEN 277
                689*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.1E-2132120IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1706.8E-18213275No hitNo description
SMARTSM003384.0E-21215279IPR004827Basic-leucine zipper domain
PfamPF001708.1E-21216277IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.599217280IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-11219274No hitNo description
CDDcd147024.23E-21220268No hitNo description
PROSITE patternPS000360222237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MQIWLPAGAP TERPQPDCPP RHARPRHSQE GMGHDEAVVT QISGQAPSPA KDQPTAFPYL  60
DWSAIQSYYG PGILPPAFFN PGHVPPPFMW APQNMPTAAF GKPYAAIYPH AGGFVHPFMP  120
LMVNPLNAEP AKSVNSKDNS LTKKLKEADG TAVSTGSGAE TCGASAPNDR TKESGRLATL  180
ANVRIQDTAI KPCVSTGSDF RVSGTPSTDW PAKDDKESKR ERRKQSNRES ARRSRLRKQA  240
ETEELARKVE LLTAENTSLR SEINKLTESS QKLRMENSAL MEKLTESAPE EAKEEVHADQ  300
TAAAPPPARV VKNFLSMMDG TGAPRSSRHM DHGAPRLRQL LGSGPLAADA VAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1231237RRSRLRK
2231238RRSRLRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMap462945405
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004969366.11e-171G-box-binding factor 3
RefseqXP_022682183.11e-171G-box-binding factor 3
TrEMBLD2CP300.0D2CP30_ELECO; G-box binding factor 3
STRINGSi001929m1e-170(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.24e-50G-box binding factor 3