PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462945801

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 565aa MW: 60270.4 Da PI: 7.8715

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462945801	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.7	1.4e-14	109	171	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e a+lk+++ 462945801 109 EDEAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSARISCVTAENAALKQQL 171 5789********************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF00170	5.5E-13	109	171	IPR004827	Basic-leucine zipper domain
SMART	SM00338	7.1E-14	109	173	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.151	111	171	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.5E-13	113	171	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.3E-16	113	171	No hit	No description
CDD	cd14704	3.09E-21	114	165	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 565 aa Download sequence Send to blast
MAEPSLLAPV AQDPFADLPF PDFQAPPVDD NFAFEDFDLD DLDLDVDFDL DLFAPDGQLS 60 SPPPPLTTSS SSAASPERGS PPSRARGGGS SRSATGKDSR STEKGDGPED EAKRRARLVR 120 NRESAHLSRQ RKKQYVEELE GKVKAMQATI ADLSARISCV TAENAALKQQ LGGAAGGAPP 180 PMPMYPAVYP LPLPMPWVHP AYAMRGSQVP LVPIPKLKPQ QPAPAAAEPP AKKARKTKKV 240 ASVSLLGLLC LFMLCGCLIP AVNRMSGAVD AGEGAAFGPS HRGRVLAVEG PRNIVGEGID 300 PKPPQNASET LPALLYLPRN GKHVKINGNL VIKSIVASEK ASSHVSSYDG KILGSQGKEE 360 TSLAIPGYVA PLKAGEVMES TIELKNKLMA LAPGDGKIYR DDDGLLPQWF SEAMSGPMLS 420 SGMCTEVFQF DVSQSSSHSN GIVPVYSNAM SNSSQNFTEN LPAGRPQKVN RRILYNEAIP 480 LQGSTSNNTE HLKAHPKNES YARSKPSSSV VVSVLADPRE AGDGNNEGRI SSKSLSRIFV 540 VVLIDSVKYV TYSCVLPFKN HSPHL

Sequence ? help Back to Top

Protein Sequence Length: 565 aa Download sequence Send to blast

MAEPSLLAPV AQDPFADLPF PDFQAPPVDD NFAFEDFDLD DLDLDVDFDL DLFAPDGQLS  60
SPPPPLTTSS SSAASPERGS PPSRARGGGS SRSATGKDSR STEKGDGPED EAKRRARLVR  120
NRESAHLSRQ RKKQYVEELE GKVKAMQATI ADLSARISCV TAENAALKQQ LGGAAGGAPP  180
PMPMYPAVYP LPLPMPWVHP AYAMRGSQVP LVPIPKLKPQ QPAPAAAEPP AKKARKTKKV  240
ASVSLLGLLC LFMLCGCLIP AVNRMSGAVD AGEGAAFGPS HRGRVLAVEG PRNIVGEGID  300
PKPPQNASET LPALLYLPRN GKHVKINGNL VIKSIVASEK ASSHVSSYDG KILGSQGKEE  360
TSLAIPGYVA PLKAGEVMES TIELKNKLMA LAPGDGKIYR DDDGLLPQWF SEAMSGPMLS  420
SGMCTEVFQF DVSQSSSHSN GIVPVYSNAM SNSSQNFTEN LPAGRPQKVN RRILYNEAIP  480
LQGSTSNNTE HLKAHPKNES YARSKPSSSV VVSVLADPRE AGDGNNEGRI SSKSLSRIFV  540
VVLIDSVKYV TYSCVLPFKN HSPHL

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269\|PubMed:22050533}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462945801

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305\|PubMed:22050533}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KF245640	0.0	KF245640.1 Eleusine coracana cultivar MR1 bZIP transcription factor a mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025800125.1	0.0	bZIP transcription factor 60-like
Swissprot	Q8LIB3	0.0	BZP60_ORYSJ; bZIP transcription factor 60
TrEMBL	A0A0K0K9Y8	0.0	A0A0K0K9Y8_ELECO; BZIP transcription factor a
STRING	Sb02g041070.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11179	30	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	6e-50	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Oono Y, et al. Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] Hu J, et al. The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] Ohta M, et al. Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] Cheng Q, et al. An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]