PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462946035
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family B3
Protein Properties Length: 958aa    MW: 109626 Da    PI: 8.6197
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462946035genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.86.2e-1617921899
               --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
               +pkk a++  g   e  +++le ++g++ +vk+   kk++  v+++GW+ F++a +L+ gDf++F +d++s f  +v++f++
  462946035 17 IPKKVATNVRGHIVE--EVKLEVPNGKTHNVKI--AKKQNDLVFGSGWSTFASAYDLEPGDFLTFAYDDHSHF--KVQIFEA 92
               999999777555334..7***************..********************************998999..9999986 PP
2B346.47e-15365456699
                ..-HHHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
         B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                +++++ +s++l +  ++a+ +   +++++t++l+   +  +W+ +l    + +r+  ++GW++F ++n+Lk gD+++F+l+++ ++ ++ v+++rk
  462946035 365 IQNSNINSCILQFGSEYARMYL--PRKDVTMRLRRpGKDYTWKAEL--HIRNRRHRVGQGWRQFTDENKLKLGDICMFQLMKNrKKLTMSVHIIRK 456
                6788889999999999998885..56889******45559******..666666789************************888*********998 PP
3B3474.7e-15511600199
                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                ffkv+     +++  +++p kf +++ g    s  ++le ++g+ + v +  +k +++ v+++GW  F +a +Lk+gD +vF+++g+s f  +v +f+ 
  462946035 511 FFKVM--VGDFQQ-EMTVPEKFSNNFRGR--ISELVKLEASDGNMYHVHV--SKDQNKLVFRSGWGTFSSAYELKQGDLLVFRYTGDSHF--KVLIFDP 600
                56666..444444.59******9777666..6778***************..9*********************************9999..9999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010191.6E-81393IPR003340B3 DNA binding domain
SuperFamilySSF1019361.12E-171495IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.7E-181695IPR015300DNA-binding pseudobarrel domain
PfamPF023621.3E-131792IPR003340B3 DNA binding domain
CDDcd100171.32E-151790No hitNo description
PROSITE profilePS5086310.9691793IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.102.5E-7210302IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.3E-9212302IPR015300DNA-binding pseudobarrel domain
CDDcd100176.31E-6216296No hitNo description
Gene3DG3DSA:2.40.330.105.2E-20353458IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.96E-21354459IPR015300DNA-binding pseudobarrel domain
CDDcd100178.12E-14359455No hitNo description
PROSITE profilePS5086312.28360457IPR003340B3 DNA binding domain
SMARTSM010194.9E-9361457IPR003340B3 DNA binding domain
PfamPF023626.3E-13365456IPR003340B3 DNA binding domain
SuperFamilySSF1019362.94E-22506603IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.109.4E-22507603IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.196508601IPR003340B3 DNA binding domain
CDDcd100171.02E-18509599No hitNo description
PfamPF023622.6E-13511599IPR003340B3 DNA binding domain
SMARTSM010194.9E-8511601IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.106.3E-10861941IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019364.32E-10862941IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS508639.079868958IPR003340B3 DNA binding domain
SMARTSM010190.027869958IPR003340B3 DNA binding domain
CDDcd100174.18E-8879941No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 958 aa     Download sequence    Send to blast
MKMEWLKKER SFYFKEIPKK VATNVRGHIV EEVKLEVPNG KTHNVKIAKK QNDLVFGSGW  60
STFASAYDLE PGDFLTFAYD DHSHFKVQIF EASCCKKEFS CVLTDYTPCV QQRCFSQGNH  120
IHSVTTERLA KHCSGSSSQS KKTSEMSPTD STSQNPNEDV SSSERSQEPM DFRWLQEPMN  180
FRWLPEINQV LLCYNMTNEQ NDQVDALVHK IRPQIPLYVT AMDKTNVASG FLAMDKDYAL  240
KYLSEENGTI TLSLPDGSET WASNLDINTD GRYALSTGWL HEGDVCVFQP SKGDNNTALI  300
FHPLEGSCRT EGPGYALSTK SPRHGAANTP YMTPRFTILN DQQERKVIKK VQKINSEIPI  360
YVAVIQNSNI NSCILQFGSE YARMYLPRKD VTMRLRRPGK DYTWKAELHI RNRRHRVGQG  420
WRQFTDENKL KLGDICMFQL MKNRKKLTMS VHIIRKERCQ ILHAFGLMAS QDHEYDGGSG  480
HKISSGSCCR RCSHCGEHYY WDHLGNRQKH FFKVMVGDFQ QEMTVPEKFS NNFRGRISEL  540
VKLEASDGNM YHVHVSKDQN KLVFRSGWGT FSSAYELKQG DLLVFRYTGD SHFKVLIFDP  600
SGCEKVFFHV VLNSCRFVDQ RGIHHEKLPS QEGFVQNQNG GSSHSRKASK MSPSDSPSQR  660
SSFAVAEDIP SPEDIQEPSN SGDHQTSTES RFILAEGCNL TRGQRDSIDT LEKKIRPETP  720
LYVTHLNKTR MSDTFLTNTF QMKTKPSRSV TLRTTRNGMQ ISRFPPLFIL DNKVQEGDAF  780
AFEASKIERR LSVTVHPLQG SYQELGTSSP INRVVVPAQY MVTKQTKLTP EQKKKVEEKL  840
QEIQPATPVF LSIKVEEKLQ EIQPATPVFL SIKRRCDIRM ELSGFSRTFA DEYLPRTPRT  900
IRLRRPELNC SWEVELMIHE VHRLCRGWKQ FVDDNALRQG DGGEEGVVAM NVHVIRGD
Cis-element ? help Back to Top
SourceLink
PlantRegMap462946035
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56234179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-16B3 family protein