PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462947732
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family bZIP
Protein Properties Length: 172aa    MW: 19245.7 Da    PI: 9.5505
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462947732genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.12.6e-153695362
               XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
               elkr rr+++NRe+A+rsRqRK++ ++ L++ v++L  + k+L+ +l+   +++ + +++
  462947732 36 ELKRKRRMESNRESAKRSRQRKQQHLDDLTTQVDQLRMKKKQLITTLNVTAQNYTATEAQ 95
               79******************************************9999888887766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-133498IPR004827Basic-leucine zipper domain
PfamPF001702.2E-123689IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1853678IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-113790No hitNo description
Gene3DG3DSA:1.20.5.1707.0E-1138110No hitNo description
CDDcd147022.59E-163989No hitNo description
PROSITE patternPS0003604156IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MSLSGGTISS GTSSGSSHGT QSYGSEGDME LQARMELKRK RRMESNRESA KRSRQRKQQH  60
LDDLTTQVDQ LRMKKKQLIT TLNVTAQNYT ATEAQNSVLR TQMMELESRL FALREIICHM  120
NANQFANAAT VTTNPSTIIG AIANYDAFGA NAWNSGMQMV QQPIDQLLYQ CF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15055KRSRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462947732
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025822603.12e-96bZIP transcription factor 44-like isoform X1
TrEMBLA0A2S3I2094e-95A0A2S3I209_9POAL; Uncharacterized protein
STRINGSb07g015450.11e-92(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37403276
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.16e-25G-box binding factor 6