PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462951772
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 231aa    MW: 24879.4 Da    PI: 8.6403
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462951772genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.85.8e-2495149156
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                k+r++W+peLH+rFv a+++L G+   +  +i+elmkv+gLt+++vkSHLQkYRl+
  462951772  95 KARRCWSPELHRRFVAALQRLRGPP-SVALKIRELMKVDGLTNDEVKSHLQKYRLH 149
                68*******************9998.67789***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512949.1592151IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.5E-2492152IPR009057Homeodomain-like
SuperFamilySSF466899.5E-1593152IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-2095149IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MEEADDKRSW MSSAQLWSCG SRDDSTGNSN GVAGAQKPAH KVSNNAFMPL NGLARSTDAA  60
EKPAGLDAAC PAAPRATRSA VTGAGAPRQQ QAERKARRCW SPELHRRFVA ALQRLRGPPS  120
VALKIRELMK VDGLTNDEVK SHLQKYRLHT RRASSDGGDQ QAAMALWSSP EKQYTTSQSG  180
SPQGPLQLTV SSRAVSVTGG DSCDGDEEEE DGKSESYSWE MQQRATKSSS S
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462951772
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020151221.11e-76myb family transcription factor EFM-like
SwissprotQ9FX846e-30HHO6_ARATH; Transcription factor HHO6
TrEMBLA0A0A9CL961e-100A0A0A9CL96_ARUDO; Uncharacterized protein
STRINGPavir.Ca02525.1.p3e-83(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49560.11e-30G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]