PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462953981
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family G2-like
Protein Properties Length: 213aa    MW: 22647.4 Da    PI: 10.5178
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462953981genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33e-3283138156
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+m+v+gLt+++vkSHLQkYRl+
  462953981  83 KARRCWSPELHRKFVAALHQLGGPQVATPKQIREVMQVDGLTNDEVKSHLQKYRLH 138
                68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.03980140IPR017930Myb domain
Gene3DG3DSA:1.10.10.605.7E-2981141IPR009057Homeodomain-like
SuperFamilySSF466894.12E-1781141IPR009057Homeodomain-like
TIGRFAMsTIGR015575.8E-2683138IPR006447Myb domain, plants
PfamPF002493.9E-885136IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
RAVAAVPPSL PPFFRTEDKV AVSVGVPGLP VLSPAVKRPL SPVPAGDEHR QNAMTRFATT  60
MPPSGPALSL HAQTQQQQQQ ARKARRCWSP ELHRKFVAAL HQLGGPQVAT PKQIREVMQV  120
DGLTNDEVKS HLQKYRLHNR RSPGATPVSQ QIVLMGGLWV PKEQSSSQSG SPQGPLEFSG  180
SGSGVGTSAA TGGGDSSSSS SDEDEKSEGY SRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-1483136154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1483136154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1483136154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1483136154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-1483141260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462953981
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025792667.19e-85transcription factor HHO5-like
TrEMBLA0A2S3IHS62e-83A0A2S3IHS6_9POAL; Uncharacterized protein
STRINGSi036412m2e-83(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25790.12e-33G2-like family protein