PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462954528
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family TALE
Protein Properties Length: 367aa    MW: 40220.4 Da    PI: 9.3557
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462954528genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox31.62.8e-101421791954
                HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
   Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                Fe   ++yp+  +++ LAk++gLt +qV++WF N R +
  462954528 142 FEHflHPYPTDGDKQMLAKQTGLTRNQVSNWFINARVR 179
                554459******************************88 PP
2BELL94.31.1e-301685372
       BELL  3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
               +e q +k+kL+s++eeV+krY+qy++q+q+v++sFe+vag  + +p++++Al+a+++hF+cLk +i +q+
  462954528 16 AEQQWRKTKLISMMEEVCKRYRQYYQQVQAVMASFETVAGFSNTTPFAAMALRAMAKHFKCLKGMIQSQL 85
               58899**************************************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.3E-10183IPR006563POX domain
PfamPF075264.2E-281481IPR006563POX domain
PROSITE profilePS5007112.228120183IPR001356Homeobox domain
SMARTSM003897.4E-11123187IPR001356Homeobox domain
CDDcd000862.08E-13123184No hitNo description
SuperFamilySSF466892.14E-17125191IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.0E-29126187IPR009057Homeodomain-like
PfamPF059203.4E-19140179IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010051Biological Processxylem and phloem pattern formation
GO:0010076Biological Processmaintenance of floral meristem identity
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010089Biological Processxylem development
GO:0010154Biological Processfruit development
GO:0010223Biological Processsecondary shoot formation
GO:0010228Biological Processvegetative to reproductive phase transition of meristem
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0048457Biological Processfloral whorl morphogenesis
GO:0048645Biological Processorgan formation
GO:0080006Biological Processinternode patterning
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MDGAASDAAG GPFSGAEQQW RKTKLISMME EVCKRYRQYY QQVQAVMASF ETVAGFSNTT  60
PFAAMALRAM AKHFKCLKGM IQSQLRNTAK VAAAKEGLSK EITMFGLQRA GALTAFGQPH  120
NIWRPQRGLP ERAVSVLRAW LFEHFLHPYP TDGDKQMLAK QTGLTRNQVS NWFINARVRL  180
WKPMVEEIHN LEMRQVHKHP ALDKSPHGMH HQTHHSSECS GKPSDPSDSQ LGQSSSITRN  240
HNIPASQGFP DELSQVSHSI QGQVTFAYNG LSTPTHQHSL ASSQHQHMGG YGGGAANGGV  300
SLTLGLHQNN KVCIAEALPA SLPPNLAHRF GLEDVSDTAY VMGSFGGQDR HFAKEIGAGH  360
LVHDFVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A6e-17129187563Homeobox protein Meis2
3k2a_B6e-17129187563Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462954528
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004970574.10.0BEL1-like homeodomain protein 9
TrEMBLA0A3L6SR340.0A0A3L6SR34_PANMI; BEL1-like homeodomain protein 9
STRINGPavir.Ea03389.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP25283881
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G02030.11e-59TALE family protein