PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462955782
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 242aa    MW: 25660.8 Da    PI: 4.7405
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462955782genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.82.7e-08106129125
        AP2   1 sgykGVrwdkkrgrWvAeIrdpsen 25 
                ++y+GVr+++ +g+++AeIrdp ++
  462955782 106 PRYRGVRRRP-WGKYAAEIRDPQSG 129
                68********.**********9664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003800.0072107185IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-5107128IPR016177DNA-binding domain
PROSITE profilePS5103210.138107171IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.1E-9107129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MVGTVANKPA PPVRQQQQQK VVKKEEEAPT KVRKLRIFCE DPDATDSSSD EADDFGVAPR  60
RVRKFVVMEA LDHPPVVSSS APPVKAAAGG AKRKVPAPAA GGAPEPRYRG VRRRPWGKYA  120
AEIRDPQSGN PVADPVRQAP AKPADAAGDA ASQQKQQLSS SAAGDYLCPF SGADAFLFGE  180
PASRSVFEQS FVEDVLSAPL IDYVADDYSC PLDLGDLPMW PGVDGGSFSD IGDDLFAGLP  240
PM
Cis-element ? help Back to Top
SourceLink
PlantRegMap462955782
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021304990.12e-22ethylene-responsive transcription factor CRF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16903697
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.14e-08ERF domain protein 10