PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462957325
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family C2H2
Protein Properties Length: 354aa    MW: 38284.5 Da    PI: 8.4909
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462957325genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00018210232123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                ykC+ C + F++   L  H+++H
  462957325 210 YKCTFCRRGFPTAQALGGHMNVH 232
                9********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5001110.4641211IPR000719Protein kinase domain
PfamPF000692.9E-1083160IPR000719Protein kinase domain
Gene3DG3DSA:1.10.510.101.9E-1483164No hitNo description
SuperFamilySSF561123.71E-1683185IPR011009Protein kinase-like domain
SuperFamilySSF576673.44E-6207236No hitNo description
Gene3DG3DSA:3.30.160.607.0E-4208234IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.762210237IPR007087Zinc finger, C2H2
PfamPF139121.1E-5210234IPR007087Zinc finger, C2H2
SMARTSM003550.0061210232IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280212232IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0003676Molecular Functionnucleic acid binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MSGRHRRGSL WSEPERIAWS PAWSRPLSEG GGGRGGRMRS LFRSIGVWFS SVSTSLAAST  60
SGATTSRKKA PSAADDVVKK PPFLLTHSLR AKVADFGFAR LGAGGDDATH VSTQVKGYLD  120
PEHLKTCQLT DRSDVYSFGV LLVELASARR PIETKREMRE RLTARWAMAR FINGAAADVL  180
DPYLARAGVA ARAREEEEEE EEEQGTRQPY KCTFCRRGFP TAQALGGHMN VHRKHRTRSG  240
AAPTAAMQQE RSYEHQYSSS LVTFAQTSHP AASSASETTP SMATGEDGSM SFHAAGERVA  300
EPKELRLFVG RDSAAGRGKG AGEVQEDHSK HDDGDHGQGE ELDLELRLGG GAGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2qkw_B6e-1578185165274Protein kinase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462957325
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP145472224
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.14e-11C2H2 family protein