PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462957652
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CAMTA
Protein Properties Length: 378aa    MW: 41946.6 Da    PI: 6.6152
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462957652genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.42.1e-56571742118
       CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                lke ++rwl++ ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kk+dgktv+E+he+LK g+++vl+cyYah+een++fqrr+yw
  462957652  57 LKEaQHRWLRPAEICEILKNYRNFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENENFQRRSYW 156
                45559*********************************************************************************************** PP

       CG-1 101 lLeeelekivlvhylevk 118
                +Lee++ +ivlvhylevk
  462957652 157 MLEEDFMHIVLVHYLEVK 174
                ***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.2353179IPR005559CG-1 DNA-binding domain
SMARTSM010767.6E-7856174IPR005559CG-1 DNA-binding domain
PfamPF038593.9E-5059173IPR005559CG-1 DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    Send to blast
NPAEKSGPAS RRSPSSARLH ARCLVPVCSA RARRSVSAMA EGRRYAIAPQ LDVQQILKEA  60
QHRWLRPAEI CEILKNYRNF RIAPEPPNRP PSGSLFLFDR KVLRYFRKDG HNWRKKRDGK  120
TVKEAHERLK SGSIDVLHCY YAHGEENENF QRRSYWMLEE DFMHIVLVHY LEVKGGKSSS  180
RIRGHDDMLQ AARTDSPLSH LPSQTTEGES SLSGQASEYE ETESADIYSG GAGYHPFSWA  240
QQHENGGGPL IGASIMSSYI PAPSVANHQG LPATTANTGF YSHGEDNLPV YHDESGVVAF  300
NGADSQLNFS SLDGVMKPDN RIHQMSLPQV STPSEQFSLT EGPGIESFTF DEIYSNGLSI  360
KDADGAGTDE GSLWQVLV
Cis-element ? help Back to Top
SourceLink
PlantRegMap462957652
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004985392.10.0calmodulin-binding transcription activator 3 isoform X1
TrEMBLA0A368SUT70.0A0A368SUT7_SETIT; Uncharacterized protein
STRINGTraes_4DL_C2F35966E.20.0(Triticum aestivum)
STRINGGRMZM2G447551_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-78Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains