PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462961198

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

Dof

Protein Properties

Length: 169aa MW: 19126.3 Da PI: 10.2506

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462961198	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	90	2.1e-28	39	85	3	49
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnv 49 ++al+cp Cds++tkfCyynnys++qPryfCkaCrryWt+GG+l v 462961198 39 DEALRCPGCDSSKTKFCYYNNYSMKQPRYFCKACRRYWTQGGSLSAV 85 7899****************************************877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-18	36	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.1E-25	40	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	22.359	42	96	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	44	80	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence Send to blast
MKEFKGTAPL VVEAWNVKLA RKQAAASTGA ERKPRPQLDE ALRCPGCDSS KTKFCYYNNY 60 SMKQPRYFCK ACRRYWTQGG SLSAVDATRT SVDHHHFCHH QAPVLVQAPL MSNCSSIWCP 120 PLQLRTSPMC CRRFGKISWR RTHLLCLMLL PVIVNSLGPN NRPTAVSSR

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462961198

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-26	Dof family protein