PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462963302
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 165aa    MW: 17867.5 Da    PI: 11.385
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462963302genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.42.7e-114891955
        AP2  9 dkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               +++ grW++e+r  +   kr+r ++g+f t+++Aa a++aa  +l+g
  462963302 48 RPRLGRWASELRLKC---KRQRLWIGTFATPQQAALAYDAAIYCLYG 91
               7899*********43...46***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.36940103IPR001471AP2/ERF domain
SMARTSM003803.3E-943109IPR001471AP2/ERF domain
SuperFamilySSF541714.77E-114895IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.104.3E-1648103IPR001471AP2/ERF domain
PfamPF008479.9E-74891IPR001471AP2/ERF domain
CDDcd000184.32E-1252104No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MAGRSTGAGA RRGGNPRSGN RKSSSRSAAP AAAPAGPGPK NQGWMGARPR LGRWASELRL  60
KCKRQRLWIG TFATPQQAAL AYDAAIYCLY GTEIPKTRRF NFPYMPFPNV SEQARAAGIP  120
VANIRAIAER HARSFAVYVE PPPPPVLPPE EIDAMNHMMA DISVV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16065KCKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMap462963302
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGPavir.Fb01907.1.p1e-28(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71520.14e-15ERF family protein