PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462967479
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 289aa    MW: 30692 Da    PI: 6.7811
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462967479genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18e-17125174355
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  GVr ++ +g+++AeIrd + ng  +r++lg+f t+e Aa a+++a+ + +g
  462967479 125 MIGVRKRP-WGKYAAEIRDSTRNG--ARVWLGTFNTPEAAALAYDQAAFAVRG 174
                67******.**********44465..**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541714.25E-21124183IPR016177DNA-binding domain
PROSITE profilePS5103221.18124182IPR001471AP2/ERF domain
PfamPF008474.3E-12124174IPR001471AP2/ERF domain
PRINTSPR003672.0E-7125136IPR001471AP2/ERF domain
CDDcd000181.08E-12127159No hitNo description
Gene3DG3DSA:3.30.730.102.7E-27127183IPR001471AP2/ERF domain
SMARTSM003802.4E-29127188IPR001471AP2/ERF domain
PRINTSPR003672.0E-7148164IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MASCSRHIPA LSAATAPNLV NYHGQGNYYY SAASSPTPMS STAPIFGSMP LFGGAIDDGY  60
CQEEDRSSSD TNMSTCTTTT TSTSPNSSAA ATERLQVVEG KGGQRSISND LQAASASAGE  120
EAPVMIGVRK RPWGKYAAEI RDSTRNGARV WLGTFNTPEA AALAYDQAAF AVRGAAAVLN  180
FPVARVRESL HAMGIGSTVM STAGDDDDSP VQALKRRHCK RRRRSQKSNT TASAELPGEV  240
QTTTKDSRHH GTQKQQLLPL RQQEQCVVEL VDLGADFLEE LLASSDSSA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-24119199981Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462967479
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004959050.14e-54ethylene-responsive transcription factor 1
TrEMBLK4A2J18e-53K4A2J1_SETIT; Uncharacterized protein
STRINGSi033089m1e-53(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.18e-20ethylene-responsive element binding factor 15