PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462969049

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

Dof

Protein Properties

Length: 299aa MW: 32010.8 Da PI: 8.3009

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462969049	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.1	9.6e-39	67	124	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprC+s+ntkfCyynnyslsqPr+fCkaCrryWt+GG+lrnvPvGgg+rknk+s 462969049 67 EGLKCPRCESSNTKFCYYNNYSLSQPRFFCKACRRYWTEGGTLRNVPVGGGCRKNKRS 124 5689****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-27	58	123	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.1E-33	69	123	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.984	69	123	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	71	107	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MTGRSKKANN TAASAHQDQH QHQHQQHQDA MGTVTLVEEA RKALRQQQEQ EVAGSGGERK 60 PRPQLVEGLK CPRCESSNTK FCYYNNYSLS QPRFFCKACR RYWTEGGTLR NVPVGGGCRK 120 NKRSCSSSTA TPPSSSSITE VINSQQNQHL VPASSTGFHN VLPTFMSTSG LELPNFSLPF 180 VPPLSLSSLA PAPAPVMAPV AATPAPVMAP VAATPTKSSF LDMLRSGLLD NQDNVLYGPT 240 ITDDINQMDV LLPMSSNFGI MQQQGMVGDN HNVNATEGGQ WPASQHGPNN GGSGAAGHV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462969049

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	8e-37	Dof family protein