PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 61021
Common NameMICPUN_61021
Organism
Micromonas sp. RCC299
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
Family bZIP
Protein Properties Length: 487aa    MW: 51845.9 Da    PI: 11.0793
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
61021genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.17.1e-12258320163
             XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
             e+e kr rr q NRe+Ar   +RK +  + L  ++k+Le+ Nk+L+++++ l +e+++l s++
   61021 258 EREAKRLRRVQANRESARQTIRRKHEIFDDLSGRAKVLEETNKTLRDQVNALYDEMKSLASKN 320
             799********************************************************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-10258322IPR004827Basic-leucine zipper domain
PfamPF001701.2E-11258320IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.944260323IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.91E-8262317No hitNo description
Gene3DG3DSA:1.20.5.1709.0E-10262313No hitNo description
CDDcd147026.01E-12263312No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 487 aa     Download sequence    Send to blast
MREKQNPAAT ILKGRGLTRS SERRARGAEY PYSRALVASD SLWCRYDAFA VRWERTQTED  60
ASATPPEPRS QRFLTSRVPR VRHQVGFERA LSTMPAAKGK GGAKAKAAAK KSSSGNGVVP  120
ATAKRARSRG GRREAGINVA GSKKDNLPVA AANMDAPLQW GRQKARGADP GAEHVDKPQI  180
RHVPEATDEE NLGFESLLQL ADAGVHLEKR GKKRAKNRGA ANSKGGKAGG KKGQVDGGKG  240
QVKKRGRGPN KVQESEEERE AKRLRRVQAN RESARQTIRR KHEIFDDLSG RAKVLEETNK  300
TLRDQVNALY DEMKSLASKN TDLRNDIKVI AEEKGMPVPE LPRQPETAPP PRMVPADGTP  360
KPTRIAPKVD IGSSKPAAPA QAQPATVAIS VPQMWPPHAA FAHLAAAAAA ANGSTSSQAP  420
PNPAMMWPPA MIPNPYAMFN PAAMAAMMGA AAGGFPPPPA FQAPTATNEA PGSPVVATTE  480
KAVAAK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0013290.0CP001329.1 Micromonas sp. RCC299 chromosome 9, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002504441.10.0predicted protein
TrEMBLC1ED640.0C1ED64_MICCC; Uncharacterized protein
STRINGXP_002504441.10.0(Micromonas sp. RCC299)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1537422
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.19e-13basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Worden AZ, et al.
    Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.
    Science, 2009. 324(5924): p. 268-72
    [PMID:19359590]