PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 64602
Common NameMICPUN_64602
Organism
Micromonas sp. RCC299
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
Family bZIP
Protein Properties Length: 661aa    MW: 66745.1 Da    PI: 6.3907
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
64602genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1506.6e-16108161356
             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
             e kr rr+ +NRe+ArrsR+RK+a + eL+ kv +L++eN++L ++l +l    
   64602 108 ETKRVRRMLSNRESARRSRRRKQAHLGELQLKVNQLQSENQDLLNKLHQLHVSF 161
             679********************************************9997655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-13105160No hitNo description
SMARTSM003384.7E-16106170IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.542108171IPR004827Basic-leucine zipper domain
PfamPF001701.7E-13108163IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-11110158No hitNo description
PROSITE patternPS000360113128IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    Send to blast
MKFGFDASSR DVHRVVQSSD RAPNERGEHS GFRTDVPMTK ASVAVAAPAK PTGAAKAPKA  60
KADGTKQDPQ AGTLSREDIA NFKLEDDGGS SDAHSDDGNV EENGDLDETK RVRRMLSNRE  120
SARRSRRRKQ AHLGELQLKV NQLQSENQDL LNKLHQLHVS FNSMMARNRM IKDNMAYLRM  180
QIMSGEPLSR EALVAATQAV AAGAQTNLQD LNHLVVGGPG AAGMNTMLMS SGGQMGVPYV  240
GGMGGMVQGG AGGMNGLVAP QGVGSMAGMG SMGSMGSMGS MRAYNLQMSQ AMNRGVNGVN  300
TGMSGMFGGA MGGTAQNMAA QNGLGNFKLE AGGGVSEFSN ASSLTQQGSM GAGDGPSIRG  360
VKGPSCISDA DPDAFIDGGG GPIAEREAAL AAAVAAQLRM GTPIGSGEVL HQLADQEAAL  420
AAQLKTFAAG AAGDGAMRAG AMQAGAMQGA GGVVGGRKIS GDEDFRLPDG AAAATAAAAR  480
AAAQGRNGRQ ASDGSCADAR RKQRAGSGDS SDARAGGGSG SGSGNNSGDG GDSELAGKGQ  540
QQQSRGALSP LDHDASPLAA PIAEKPPHIV DQVGVDAADS TVLGFLSSPI LEGEVVDGWR  600
HGGVDFDDWA STVIDGGGGM GTETKEPGTL GKNARTASMN RVASLEHMAK RAQAAGGPVS  660
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122129RRSRRRKQ
2124129SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0013330.0CP001333.1 Micromonas sp. RCC299 chromosome 15, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002506434.10.0predicted protein
TrEMBLC1EIJ80.0C1EIJ8_MICCC; Uncharacterized protein
STRINGXP_002506434.10.0(Micromonas sp. RCC299)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-10bZIP family protein
Publications ? help Back to Top
  1. Worden AZ, et al.
    Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.
    Science, 2009. 324(5924): p. 268-72
    [PMID:19359590]