PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676742284
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family VOZ
Protein Properties Length: 571aa    MW: 64650.7 Da    PI: 5.9727
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676742284genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ409.27.9e-1263095222215
        VOZ   2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsll 101
                ppsaflgpkcalwdctrpa+g +w+ dycs +h +lalne+lpgt+pvlrp+gi+lkd+ll++al+ak+ gk+vgip+cega+++k+pwn+aelf+l+l+
  676742284 309 PPSAFLGPKCALWDCTRPAHGYDWFLDYCSDYHGNLALNEDLPGTAPVLRPGGISLKDNLLIDALRAKTLGKNVGIPVCEGAVNTKCPWNSAELFHLELV 408
                7*************************************************************************************************** PP

        VOZ 102 egetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvs 201
                egetirewlffdkprra++sgnrkqrslpdysgrgwhesrkq+mke++g+krsyymdpqp++ fewhl+ey+ine+d +alyrlelkl+++kks+kgkv+
  676742284 409 EGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSYYMDPQPPGPFEWHLFEYQINESDVCALYRLELKLTNGKKSPKGKVA 508
                **************************************************************************************************** PP

        VOZ 202 kdsladlqkklgrl 215
                kd+ladl+kk+ ++
  676742284 509 KDPLADLEKKMEKM 522
                **********9876 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 571 aa     Download sequence    Send to blast
MVFNLQHLYI YNDSAKVPQL KENSRPVWCD DSFLPLLRCI ISLLLPSSSS PHHHHPGNFS  60
SFFFVFWLWE EMSNNPKITC VSSAHQNLVE KLMQLQERFC HLQAARKEGR LNDHALLEAQ  120
ISQNLREWQA ELSAPSPESS LLGGSISKFS EEIARLWKLN DDEDDATSSL KEHSAPKSDA  180
FDQILSPPQH LEWTSEPFNQ TPFDVNFLSG FEKFVTPFII VFLSQDAVNN SETHGQQLHC  240
PFQEFDPSIN TAPDFHGQKL SHLDITSQLD YHLSEVRQEF NNTPSVKLDV SDESENYAEF  300
TTPSSVRVPP SAFLGPKCAL WDCTRPAHGY DWFLDYCSDY HGNLALNEDL PGTAPVLRPG  360
GISLKDNLLI DALRAKTLGK NVGIPVCEGA VNTKCPWNSA ELFHLELVEG ETIREWLFFD  420
KPRRAYDSGN RKQRSLPDYS GRGWHESRKQ LMKEQEGQKR SYYMDPQPPG PFEWHLFEYQ  480
INESDVCALY RLELKLTNGK KSPKGKVAKD PLADLEKKME KMGQLTPEVA SDKPSPPTKG  540
RAKGTKGVKL AASNLTQETK IPATIDPSSH Q
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ1 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Binds as a dimer to the palindromic sequence 5'-GCGTNNNNNNNACGC-3'. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00018PBMTransfer from AT2G42400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676742284
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. Down-regulated by far-red light (at protein level). {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018433046.10.0PREDICTED: transcription factor VOZ2
RefseqXP_018433047.10.0PREDICTED: transcription factor VOZ2
SwissprotQ9SLB90.0VOZ2_ARATH; Transcription factor VOZ2
TrEMBLA0A3P5ZA030.0A0A3P5ZA03_BRACM; Uncharacterized protein
STRINGBra004691.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110602534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42400.10.0vascular plant one zinc finger protein 2
Publications ? help Back to Top
  1. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  2. Koguchi M,Yamasaki K,Hirano T,Sato MH
    Vascular plant one-zinc-finger protein 2 is localized both to the nucleus and stress granules under heat stress in Arabidopsis.
    Plant Signal Behav, 2017. 12(3): p. e1295907
    [PMID:28277968]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]