PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676757736
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 185aa    MW: 21560.8 Da    PI: 5.6625
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676757736genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1414e-1389147563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +++rr+ +NRe+ArrsR RK+  ++eL   v  L +eN  L+++l++ +++ +++ +e+
  676757736  89 RKQRRMLSNRESARRSRMRKQRHLDELWSQVIRLRNENNCLIDKLNRVSETQDSVLKEN 147
                79************************************************999888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.8E-1485149IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.79587150IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-1089138No hitNo description
SuperFamilySSF579595.49E-1289138No hitNo description
PfamPF001705.3E-1189147IPR004827Basic-leucine zipper domain
CDDcd147028.67E-1790138No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MIPAEITGYF QYISPENLTT IPAEFNIINM PSSPTTSSSS LNYLNDLINN NNNNYSSSSN  60
GQDLMMSNNS TSDEDHHNHH QSIIILDERK QRRMLSNRES ARRSRMRKQR HLDELWSQVI  120
RLRNENNCLI DKLNRVSETQ DSVLKENSKL KEEAADLRRL VCELKSNKNN NNDDDNSFLR  180
EFEEV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1101108RRSRMRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00262DAPTransfer from AT2G04038Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap676757736
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013613647.11e-103PREDICTED: basic leucine zipper 43
TrEMBLA0A0D3AVT91e-102A0A0D3AVT9_BRAOL; Uncharacterized protein
STRINGBo2g138370.11e-103(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM28922469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04038.12e-67basic leucine-zipper 48