PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676774144
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family NAC
Protein Properties Length: 206aa    MW: 23143.8 Da    PI: 9.1948
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676774144genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.62.8e-11103151149
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 
                lp+G+rF Pt+ el+++yL+ +++g ++++++ i+ +d+++veP +Lp+
  676774144 103 LPVGYRFYPTEVELISFYLRIQLDGGNTTINSLIPILDVFNVEPTQLPM 151
                799***************************999**************93 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-1198153IPR003441NAC domain
PROSITE profilePS5100511.692103206IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    Send to blast
MYEELTSVSG YLCNRLLSTG KDGFGTGGMA SFCNLPRRPK YPEGTLLQLR HVPRTQNIKA  60
DKLAHSARSQ SLHVVHIDTE LPVWLTKSKQ IFCKRKQTIE DELPVGYRFY PTEVELISFY  120
LRIQLDGGNT TINSLIPILD VFNVEPTQLP MNQLWDANPR SPLLLRPHIL SLGPLGLSLC  180
PHVLSLGHLG SPLSDGRFVS REVRKS
Cis-element ? help Back to Top
SourceLink
PlantRegMap676774144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44350.15e-23NAC domain containing protein 61