PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676785420
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 399aa    MW: 44453.7 Da    PI: 9.9508
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676785420genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.61.3e-13332378248
                XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                k+ k ++r++kNRe+A rsR+RK+a++ eLe +v++L +eN++L k+
  676785420 332 KREKIQKRMIKNRESAARSRARKQAQTMELEAEVEKLRKENHELLKK 378
                66799*************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.6E-13326378No hitNo description
SMARTSM003388.2E-11331397IPR004827Basic-leucine zipper domain
PfamPF001705.5E-11332379IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.53333378IPR004827Basic-leucine zipper domain
CDDcd147076.49E-21335379No hitNo description
SuperFamilySSF579595.75E-10335379No hitNo description
PROSITE patternPS000360338353IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    Send to blast
MDNNWYLGTG SSGAMNRLQV STPLSRQGSI FSWTLDQIKN NLGRDCGSMN LEELLMNVSS  60
AEETQGVVPS NGANEGLHRQ GSTLPRILSQ KTVDEVWKYI TEEEEHTKND GGRTNVPQIQ  120
RQQTLGDITL EEFLVRAGAM GNNSSGGDIH DPSSSILVSP NTNLSVEFQQ KPVVSNVLNN  180
IVPMSKNRGS YFHPHVNGST STYQPRQQQH QQQNLFLPQQ PVTPKPHGYG YGTQLAFTSG  240
QVNSHGIRDS FMETGDQSHL ENNISLVQSI TTVPGGAMRV DTCSPVTQFP VLDGIQNTNF  300
GSSLVSPFPY NISGSNSVRN RKNSNIIYVE KKREKIQKRM IKNRESAARS RARKQAQTME  360
LEAEVEKLRK ENHELLKKQG KGIVNRSKKH LRRTKSDIQ
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676785420
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009101826.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 8
RefseqXP_009101827.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 8
SwissprotQ9FMM71e-106AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBLA0A078GCF30.0A0A078GCF3_BRANA; BnaA06g37000D protein
STRINGBra033649.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156311417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42910.18e-98bZIP family protein