PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678293710
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 240aa    MW: 26130.1 Da    PI: 4.5949
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678293710genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.53.3e-182878155
        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               + y+GVr ++ +g+Wv+eIr p++   ++r++lg++ tae+Aa+a++ a+ +++g
  678293710 28 PVYRGVRMRS-WGKWVSEIRQPRK---KTRIWLGTYPTAEMAARAHDVAAMSIKG 78
               68*****998.**********843...6**********************98875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-132877IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-312987IPR001471AP2/ERF domain
PROSITE profilePS5103223.2222986IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-212987IPR016177DNA-binding domain
SMARTSM003804.2E-372992IPR001471AP2/ERF domain
CDDcd000183.89E-313088No hitNo description
PRINTSPR003671.4E-103041IPR001471AP2/ERF domain
PRINTSPR003671.4E-105268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MGEPRPQPCT GGEKRGKKRP KDCGTKHPVY RGVRMRSWGK WVSEIRQPRK KTRIWLGTYP  60
TAEMAARAHD VAAMSIKGVS AVLNFPHLRD SLPRPASLSP RDVQEAASRA AAMEGLTLTP  120
PRPPPLPLAA REEDEDENLT STSVSTAVSI SGAASMETVN DSSDEDDDDL GEIIELPTLE  180
ESDDCRSQFT QEVGSAEGWM QPPWWDKDFC DYFTEQVSGG GGSLISITCS FETTTESGGG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-202187673Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678293710
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072408.13e-65dehydration-responsive element-binding protein 3
TrEMBLA0A2G9HTV61e-69A0A2G9HTV6_9LAMI; Uncharacterized protein
STRINGSolyc03g120840.1.11e-58(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.17e-50ERF family protein