PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678298837
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 208aa    MW: 23699.5 Da    PI: 4.5878
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678298837genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.25.7e-204190255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr++k +g+W+AeIrdp        kr++lg++ t+eeA +a++  r+++eg
  678298837 41 KYRGVRRRK-WGKWAAEIRDP-----IlrKRVWLGTYETPEEASEAYELKRLQIEG 90
               8*****998.**********8.....456***********************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103220.3141101IPR001471AP2/ERF domain
SMARTSM003806.6E-2041107IPR001471AP2/ERF domain
CDDcd000182.92E-224181No hitNo description
SuperFamilySSF541717.85E-174191IPR016177DNA-binding domain
PfamPF008478.2E-144190IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-214190IPR001471AP2/ERF domain
PRINTSPR003673.8E-104253IPR001471AP2/ERF domain
PRINTSPR003673.8E-106480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MKKLRIICAD PYATDSSDDD EYNKIKNVVY EVCFRFTGTG KYRGVRRRKW GKWAAEIRDP  60
ILRKRVWLGT YETPEEASEA YELKRLQIEG LVNSQQQTHI PAVSSERVHE TSLVDHKGTE  120
SAADEGLTRL AQIGEELDLD VDIHSLLAED FMHLSKALDD LPLFGPEDPG FLQALPDFDF  180
DFDDSWIQDH EAPMPHRTGA SSFNIACL
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678298837
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070810.19e-36ethylene-responsive transcription factor ERF118-like
SwissprotQ9CA275e-21EF118_ARATH; Ethylene-responsive transcription factor ERF118
TrEMBLA0A4D9BPQ71e-43A0A4D9BPQ7_SALSN; Uncharacterized protein
STRINGMigut.L01068.1.p2e-33(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-23ERF family protein
Publications ? help Back to Top
  1. Tran MK,Schultz CJ,Baumann U
    Conserved upstream open reading frames in higher plants.
    BMC Genomics, 2008. 9: p. 361
    [PMID:18667093]