PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678298885
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 366aa    MW: 40229.9 Da    PI: 7.2042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678298885genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-1778127255
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  678298885  78 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 127
                59*******.**********93....35999**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.2E-1178127IPR001471AP2/ERF domain
SMARTSM003801.7E-3378141IPR001471AP2/ERF domain
PROSITE profilePS5103222.08978135IPR001471AP2/ERF domain
CDDcd000186.26E-3078134No hitNo description
SuperFamilySSF541713.86E-2178135IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.102.0E-2978134IPR001471AP2/ERF domain
PRINTSPR003672.0E-97990IPR001471AP2/ERF domain
PRINTSPR003672.0E-9101117IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MSPPTFIKRI LLANHSWFLV FFASTKQPCV MEEALRRLND TLLPSTDPGL PRRCGAIKRT  60
LKDATGAGSA GGGGGTMRYR GVRRRPWGRY AAEIRDPQSK ERRWLGTFDT AEEAACAYDC  120
AARAMRGVKA RTNFVYPNSP TNHAGENLVH PFGFGKPGSQ SSILGSRHHT PVSPDLDPTT  180
RPSFRSTATA HNASNSLNLL FLRDYVNNSC YSSSSKLSQP SFIQPFEQQP FDSPCTPISQ  240
SQKGQLLSDD QTESAMDSDI SGSGLLQEVL KGFFPKPKTE EQPPPSAAPV LLSDNRWSQE  300
DSGRDDYLVS PVDHFGFYPP FDNWDLGNFL LQDSPSTAAP VSNGFLGDIF HYQEALNVFS  360
ASVQNV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A7e-1968134471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap678298885
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086646.13e-83ethylene-responsive transcription factor ESR2-like
TrEMBLA0A2G9GV385e-79A0A2G9GV38_9LAMI; Uncharacterized protein
STRINGMigut.K00605.1.p3e-79(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-13DORNROSCHEN-like