PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678300077
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 211aa    MW: 24297.6 Da    PI: 9.7624
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678300077genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.32.2e-0994135351
        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                 +GV+++    +W A I++      +k+++lg+  + eeAa+++++a+ 
  678300077  94 MRGVYFKN--LKWQAAIKVD-----KKQIHLGTVRSQEEAARLYDRAAF 135
                79***966..5********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541717.19E-893138IPR016177DNA-binding domain
SMARTSM003801.3E-493150IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-6100140IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MVSIRRRKLL STCDEQKFFR KESSTEETRS LSLNAPSPCD FKLKEEATSG NGLCSSNVIA  60
SSSSKEKVVQ QVSEVKRRRQ HRLKHIENQE PCIMRGVYFK NLKWQAAIKV DKKQIHLGTV  120
RSQEEAARLY DRAAFMCGRE PNFQLSKEEK QELSKFSWDE FLAMTRLAIS SKRSQRRRVK  180
KLNDSNWEGN KENDACLSPS DDEANDMVAA C
Cis-element ? help Back to Top
SourceLink
PlantRegMap678300077
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089068.19e-73ethylene-responsive transcription factor-like protein At4g13040 isoform X1
RefseqXP_011089071.19e-73ethylene-responsive transcription factor-like protein At4g13040 isoform X2
RefseqXP_011089072.19e-73ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLA0A4D8ZWT01e-63A0A4D8ZWT0_SALSN; Uncharacterized protein
STRINGEOX938574e-61(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA62462433
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-42ERF family protein