PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678300280
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 411aa    MW: 44685.6 Da    PI: 6.6022
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678300280genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH223e-07238264430
                HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
        HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                +h+ +Er RR++iN ++  L+el+P +
  678300280 238 SHSLAERARREKINARMKLLQELVPGC 264
                8************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.9E-8232266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.26E-5232266No hitNo description
PROSITE profilePS508889.718234286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-8237266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.9E-5238264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 411 aa     Download sequence    Send to blast
MAMVPNTVLF VDRESRKPGK RSYEDLLLQI ASAWRLGIVG RNREVVAWVM EDPVAEGSLI  60
TGGVGVKLGG MGFGLGLDEI HGIIAVTPGT ENTLFTAPLE LPPPGAVELL VKKDITNEAI  120
PPPFCPSKAS LIDHATKFSV FTSTDASLES TTIMSALGSM KVEIVKQEAL DSNSWPEGSS  180
PAVSNQSLNP SKRKRREKQA NESNKKEGKP GENERNVGSG EELPYVHVRA RRGQATDSHS  240
LAERARREKI NARMKLLQEL VPGCNKFLSM RLAAVADPRT DFNLDCFLAA TESGTSVDTS  300
HPGLFAPPIW PDNQMDFIRQ HPYQQPSQFN VQHQPSWGRE EDPAASFLAT EDFPPRYSSP  360
LNSSKPKPSN ACFFCLHYFD HGGLLCSFST LGSFESGAMK AQGMGAAGLC T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192197RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678300280
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011078863.11e-110transcription factor bHLH48
TrEMBLA0A2G9HR441e-102A0A2G9HR44_9LAMI; Uncharacterized protein
STRINGMigut.K00063.1.p3e-92(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40292342
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.21e-43bHLH family protein