PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678300577
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bZIP
Protein Properties Length: 219aa    MW: 25390.4 Da    PI: 6.794
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678300577genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_149.97e-16124182563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +++rr+++NRe+ArrsR RK+  +++L   v  L +eN++L++el++ +++ +++ +e+
  678300577 124 RKQRRMISNRESARRSRIRKQRHMDQLWSQVVCLRNENQQLRDELNRVSENHEQVLQEN 182
                689***************************************************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-15120184IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.335122185IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-11122177No hitNo description
PfamPF001705.2E-14124182IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-12124175No hitNo description
CDDcd147021.26E-18125175No hitNo description
PROSITE patternPS000360127142IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MSTIALKRHH VGPFPFYKFS PSTSLPSPSS TSLTPFLQSI LETMQPTELP EHHLFPSTIM  60
QFPDCFSFAT SILPAYNLNG FPNPLFQFHV EHQLQEGNLK STSFSNNSTS DEADEQQQSI  120
INERKQRRMI SNRESARRSR IRKQRHMDQL WSQVVCLRNE NQQLRDELNR VSENHEQVLQ  180
ENAQLKEEAS EFRQVLTDIQ LNSPYSASYA QLHDLVCIK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136143RRSRIRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00647PBMTransfer from LOC_Os02g49560Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678300577
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099071.11e-73basic leucine zipper 43
SwissprotQ9FMC21e-38BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A4D9B9G02e-69A0A4D9B9G0_SALSN; Uncharacterized protein
STRINGMigut.H00570.1.p8e-63(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.14e-48basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]