PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678301855
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family DBB
Protein Properties Length: 445aa    MW: 49224.1 Da    PI: 5.8689
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678301855genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.11.1e-05342537
   zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg........H 37
                C+ +++ +++ fC+ +   lC +C  + H +        H
  678301855  3 GCDFCGDRPAIVFCRADTAKLCLSCDHHVH-SvntlsqkhH 42
               5**************************999.3356666644 PP
2zf-B_box23.51.1e-074489342
   zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                r+C+++  +++  +C +++  lC++C l  H +      H+++p+
  678301855 44 TRICDNCAAEPAVVHCATDGLVLCQECDLDAHPNcssssaHRRSPI 89
               689*****************************77888899998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.257146IPR000315B-box-type zinc finger
SMARTSM003369.7E-8146IPR000315B-box-type zinc finger
CDDcd000211.08E-6446No hitNo description
PROSITE profilePS5011910.3524289IPR000315B-box-type zinc finger
CDDcd000211.58E-84589No hitNo description
SMARTSM003360.0144789IPR000315B-box-type zinc finger
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MPGCDFCGDR PAIVFCRADT AKLCLSCDHH VHSVNTLSQK HHRTRICDNC AAEPAVVHCA  60
TDGLVLCQEC DLDAHPNCSS SSAHRRSPIS GFSGCPSAMD LASAWGFDLE NQQRNQAASC  120
EWGGLLDSED VMVPSASSVV GYGGGLAMIK KKGTVVCGKQ KEAILKQLLE LLADGGDDGV  180
EPRTPSADGW PWESSRDEQQ RQERKPSTPQ TPLLTVQTPH RVPNQESNMS WNNSSIGDKS  240
QIWDFNVGQF RAPEESSPLD PEYGDCDFYG SAATSSKQQG IDIPGYICPI PDKDIPPFNV  300
SIHFSSFMLL FNLSYVGIAC LLMNSNLGWC DRTSLEKMSL AWPELNVVAL HNRFMEYVMY  360
AIIYWNAEYT ERSYPEPWAR NIAGKQITSV NIDIQQTRTP SWSQRLSAHG SDTFSQKQQD  420
AHGAFSQKSR QRHAAIQGKE KNKEV
Cis-element ? help Back to Top
SourceLink
PlantRegMap678301855
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086854.21e-94LOW QUALITY PROTEIN: zinc finger protein CONSTANS-LIKE 14
TrEMBLA0A2G9I1Y51e-91A0A2G9I1Y5_9LAMI; Uncharacterized protein
STRINGMigut.K01031.1.p5e-86(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67032126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28050.17e-52B-box type zinc finger protein with CCT domain