PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678302563
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 425aa    MW: 47935.7 Da    PI: 9.0405
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678302563genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.5e-08366394434
                HHHHHHHHHHHHHHHHHHHHHCTSCC.C...T CS
        HLH   4 ahnerErrRRdriNsafeeLrellPk.askap 34 
                ++ + Er+RR+riN+++  Lr l+Pk +   +
  678302563 366 KNLMTERNRRKRINDGMLALRALVPKiS---K 394
                55689********************966...3 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF142151.7E-17120257IPR025610Transcription factor MYC/MYB N-terminal
SuperFamilySSF474594.71E-8357408IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.41E-5360395No hitNo description
PROSITE profilePS508889.763362411IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.1E-6364399IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-5366394IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MRRRFVCRMN AKIALRGRVY EEFLSRGDAC RQSSSSVAAS MFLGRHLSRE WDNEISNEVS  60
VTVYWISRQR IRYSGFDDEI RKNCQVCYAF AVQKNGSTVR IKEDAIQGLC TKGMAPWDIL  120
RALVNGKTWA YCVVWKLGDD PSRFIEWSAC LCNGGSVRTK DENLPEKHKI AECKDGTVKH  180
LMTTQACEKL SQLPPAIPLY SGVHGDVVIS KQPRWCSGNE THGTQVLIPV PGGLIELYST  240
KRVPKDENMI ACITNAFAFS PAQENMIPED QEKRIPSSLL CNLSYKQRNY SSLEDSPACS  300
GLSSDHLLLK LVPNHSIDSP SSLPAKSGCE EYADSSKGKS EETYPNRNDD NSRIKRRFEK  360
GPYKSKNLMT ERNRRKRIND GMLALRALVP KISKVPKFQL VETTYHLLNP SHNFPQIDGQ  420
SLYAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1354376KRRFEKGPYKSKNLMTERNRRKR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678302563
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080803.12e-88transcription factor bHLH90
TrEMBLA0A2G9GLU81e-84A0A2G9GLU8_9LAMI; BHLHZip transcription factor BIGMAX
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99292227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10610.15e-45bHLH family protein