PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678306424
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 236aa    MW: 26576.1 Da    PI: 7.6712
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678306424genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH149.5e-0557101553
                HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
        HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                ++erE++ R+++N+ f  L  +l  +    ++ + Ka+ L +A++++k+
  678306424  57 KSEREKKKREHLNENFLALANCLEVS----DQNNGKAALLIEATRFMKD 101
                789********************998....8999999999999999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.23E-1050118IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.2952102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-853120IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-454107No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MNGTPLDQRE RGTPLLNSVL LRPAVNDRSL DPRSSTNWVM DKSRKKNHGK TPTRLPKSER  60
EKKKREHLNE NFLALANCLE VSDQNNGKAA LLIEATRFMK DILSQIESLK KENAALLSEF  120
HYITSERDEL RDDNTMLESQ VAELQKEIKA RGSLQLDLNA TPPPEATSTP LAPPTMGDLQ  180
SHCQAMDSFQ ATAFCPTVQV SHQGSHAQEL NPRHILKPHP RYPTPADQWT SLVLEK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14364RKKNHGKTPTRLPKSEREKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678306424
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012853013.11e-52PREDICTED: transcription factor bHLH47-like
TrEMBLA0A022Q6U63e-51A0A022Q6U6_ERYGU; Uncharacterized protein
STRINGMigut.D01831.1.p4e-52(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43071934
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-42bHLH family protein