PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678306966
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family B3
Protein Properties Length: 120aa    MW: 13713.8 Da    PI: 8.5126
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678306966genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.32.3e-126613087
               ..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
         B3 30 keesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
               ++    ++l+++ grsW +kl+++k ++++ + +GW eF  +n+ ++gD ++F+l+++
  678306966  6 EK--SSVILQNPYGRSWPMKLRVWKEGKTCRMFEGWHEFLISNRPEVGDECIFELVSH 61
               33..369**********************99999********************8753 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086312.055177IPR003340B3 DNA binding domain
CDDcd100175.94E-13174No hitNo description
Gene3DG3DSA:2.40.330.101.1E-12274IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.92E-14663IPR015300DNA-binding pseudobarrel domain
PfamPF023625.9E-10761IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MHDLAEKSSV ILQNPYGRSW PMKLRVWKEG KTCRMFEGWH EFLISNRPEV GDECIFELVS  60
HGLETGSSFK MRILAKMKPS PCVDGFSFVL NSGHKCPAAS ECMNSLFRVK VNRHHTSNDI
Cis-element ? help Back to Top
SourceLink
PlantRegMap678306966