PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678310051
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Nin-like
Protein Properties Length: 207aa    MW: 24624.3 Da    PI: 9.53
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678310051genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK78.47.8e-2589137250
     RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50 
                + +++++dl+ yF+lp++dAA+ ++vc+Tv+K+iCR+ G++RWPhRk+ 
  678310051  89 TRNLKMKDLKDYFDLPMEDAARRMNVCPTVIKKICRRSGVERWPHRKVD 137
                689********************************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151915.00579162IPR003035RWP-RK domain
PfamPF020423.1E-2191136IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MEGTRKVKKF LLHYFKTCEE EGYFPLEDPL FPFYDALSVG SNVLDGFISS SPDNTDDALV  60
EEKQKMKPLD GESSAEYKKV SLSKQRERTR NLKMKDLKDY FDLPMEDAAR RMNVCPTVIK  120
KICRRSGVER WPHRKVDTYL LNRSLLSLNN IFYDVVFMYM QIKSIEGKIS RKLKKLESKD  180
EDERERARAD IRKHRKELER IYQEYSR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678310051
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35052027
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76350.13e-13Nin-like family protein