PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678310705
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 381aa    MW: 41535.2 Da    PI: 7.5629
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678310705genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.45.4e-13312357655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +++Er RR ri +++ +L+el P+     +k  s a++L +AveYIk+Lq
  678310705 312 SIAERMRRTRISERMKKLQELFPNM----DKQTSTADMLDMAVEYIKDLQ 357
                689*********************7....688*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.818306356IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-16309368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.06E-13310361No hitNo description
Gene3DG3DSA:4.10.280.103.8E-15311368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-13312362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.7E-10312357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MSSSCSFSGN QNSKHLEMEF VKSREFMGSD FFQQSPGLAR YRSAPSSFLA ALLDSPADNS  60
SSGDESDAAL FSAIWSGPRD LNHKIGGGGD DSQMQPQFHL KQEIGAEPGL TSYESPAAVS  120
GGGTVVGSYS AGLETQVQVR LNSGNGISGS NLLRQSSSPA GFFNGFGVSS SHLAFSSSGA  180
SSSPRMMPSI PENGSIDDGC ENGRPRNGNI RELEAAPFSH ETWSDSSRIN DMKRNRDGNL  240
KMFSAFNEMQ NQVHNASVDT VKSSASLVHH LNLPKSLNEK GEPEKFKFLQ FQPDVVPCQI  300
RAKRGCATHP RSIAERMRRT RISERMKKLQ ELFPNMDKQT STADMLDMAV EYIKDLQRQV  360
QTLSETKTKC VCSPPERNTG K
Cis-element ? help Back to Top
SourceLink
PlantRegMap678310705
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087339.11e-135transcription factor bHLH130
TrEMBLA0A2G9FZD61e-130A0A2G9FZD6_9LAMI; Uncharacterized protein
STRINGMigut.B01333.1.p1e-101(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.11e-47bHLH family protein