PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678311036
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family ERF
Protein Properties Length: 175aa    MW: 19466 Da    PI: 9.934
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678311036genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.66.4e-1893144256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                +y+GVr+++ +g+++AeIrdp     +  r++lg+++t  +Aa+a++ a+ k++g+
  678311036  93 HYRGVRRRP-WGKYAAEIRDPLR---KgSRVWLGTYDTDVDAARAYDCAAFKMRGA 144
                7********.**********732...24**********99**************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.9E-3292152IPR001471AP2/ERF domain
PfamPF008473.9E-1393143IPR001471AP2/ERF domain
SMARTSM003802.6E-3493157IPR001471AP2/ERF domain
PROSITE profilePS5103224.13193151IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-2393153IPR016177DNA-binding domain
CDDcd000181.99E-2793151No hitNo description
PRINTSPR003672.4E-1394105IPR001471AP2/ERF domain
PRINTSPR003672.4E-13133153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MENHDEFSAL ELIRHHLLGD YPAAESFLGS LAVLNPNLFE DNFSSSWGFA GEAITTLLGS  60
SNPKQGTEVP PPPPRVKSEA EYDRIVPANG KRHYRGVRRR PWGKYAAEIR DPLRKGSRVW  120
LGTYDTDVDA ARAYDCAAFK MRGAKAILNF PMDAGKYGPP ANVGRRKRGK SVFMN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-2792152464ATERF1
3gcc_A9e-2792152464ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678311036
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858579.17e-52PREDICTED: ethylene-responsive transcription factor ERF106
SwissprotQ9LY055e-44EF106_ARATH; Ethylene-responsive transcription factor ERF106
TrEMBLA0A022PWJ92e-50A0A022PWJ9_ERYGU; Uncharacterized protein (Fragment)
STRINGMigut.F00526.1.p3e-51(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-45ERF family protein
Publications ? help Back to Top
  1. Kim H,Go YS,Suh MC
    DEWAX2 Transcription Factor Negatively Regulates Cuticular Wax Biosynthesis in Arabidopsis Leaves.
    Plant Cell Physiol., 2018. 59(5): p. 966-977
    [PMID:29425344]