PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678311340
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 219aa    MW: 25062.1 Da    PI: 8.397
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678311340genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-094899255
               HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
               +  h  +Er RR+++   ++ L +llP+     +++K s ++   +A++YI++ q
  678311340 48 KILHRDIERHRRQEMAALYASLGSLLPNeY---TKGKRSISDHMLEAMNYIRNIQ 99
               6779************************77...*******************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.58E-745103No hitNo description
SuperFamilySSF474593.4E-1245115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.0044698IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-948113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000109.2E-74899IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MCMFSPPAVQ NELLLKIPKI SAQEMGGASP RKVEFKEIDE MNECKKRKIL HRDIERHRRQ  60
EMAALYASLG SLLPNEYTKG KRSISDHMLE AMNYIRNIQG RIQELRERRD ELLSNSSCPQ  120
GNNDVVCVSL QSCLEIVEIQ MKCLSSKREL RSLPKVLTEL INSDLRVTCC ILSRYDNRMF  180
FTIQAKVNDP DGHVDPVLLK QKLMEAAVFG SATQVPFSF
Cis-element ? help Back to Top
SourceLink
PlantRegMap678311340
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076502.21e-38transcription factor bHLH120-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA59824109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.11e-32bHLH family protein