PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678317505
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family MYB_related
Protein Properties Length: 247aa    MW: 27613.9 Da    PI: 7.0409
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678317505genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.83.2e-15116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E++l++ + +++G+g+W++Iar+  +++t+ q+ s+ qky
        678317505 116 PWTEDEHLLFLMGLQRYGKGDWRSIARHYVTTKTPTQVASHAQKY 160
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007172.91671IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.2E-12107166IPR009057Homeodomain-like
PROSITE profilePS5129419.803109165IPR017930Myb domain
SuperFamilySSF466894.16E-16110165IPR009057Homeodomain-like
SMARTSM007172.1E-12113163IPR001005SANT/Myb domain
TIGRFAMsTIGR015575.2E-17113164IPR006447Myb domain, plants
PfamPF002496.7E-13116160IPR001005SANT/Myb domain
CDDcd001672.06E-10116161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MDGRPDFQGS SHFGPEESTW SFADNKVFEI ALSEITTLNH DSPSFFDEIA RKIPWKSARD  60
IQNHYQALVH DLEMIESGPF PVPDYFASRS GTTEGNSTWS AVGRTKIGQP HRKGVPWTED  120
EHLLFLMGLQ RYGKGDWRSI ARHYVTTKTP TQVASHAQKY FRRQASSTPA EKRRPSIHDV  180
QVVNTPALIE RLSVSGLVPS FSTQIPFLSD GGLSFPMISG GGFAPTDPLF FNPYGIATNY  240
SAPAFWF
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678317505
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011098014.12e-68transcription factor SRM1-like
SwissprotQ8S9H72e-42DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A4D9BUN91e-64A0A4D9BUN9_SALSN; Uncharacterized protein
STRINGMigut.L00854.1.p7e-65(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA52342032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.12e-44MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]