PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678317588
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 210aa    MW: 23366 Da    PI: 9.0352
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678317588genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH406.9e-134592355
               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                +h+e+Er RR+riNs +++L+++lP+       K +Ka+ L +Av+ +++Lq
  678317588 45 NSHKEAERHRRKRINSHIATLKSILPNV-----IKTDKASLLGEAVRRVRELQ 92
               68*************************7.....5****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.8244291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.2E-134594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-104592IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-94694No hitNo description
SuperFamilySSF474592.09E-1346103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-114897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550219.46E-8125197No hitNo description
CDDcd048735.62E-8129192No hitNo description
Gene3DG3DSA:3.30.70.2601.4E-6129194No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MSFIIPTPSA PKLEVEEEKM SSHGCKIEHR SFYPGVMVET SASSNSHKEA ERHRRKRINS  60
HIATLKSILP NVIKTDKASL LGEAVRRVRE LQKAAAQLSK EATLNFYFPG ETDELVVCHC  120
ETSGLVKATL CCEDRPEIML DLVQVLKSTE ARVMRAEMST LGGRTMSVLW VQLQADDDAG  180
VARLGNALKP VMEKSGQALP VRKRIRHFPS
Cis-element ? help Back to Top
SourceLink
PlantRegMap678317588
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099996.11e-59transcription factor bHLH30-like isoform X2
RefseqXP_020554627.11e-59transcription factor bHLH30-like isoform X2
TrEMBLA0A2G9G2384e-66A0A2G9G238_9LAMI; Uncharacterized protein
STRINGMigut.H02300.1.p7e-53(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.12e-34bHLH family protein