PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678318612
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family G2-like
Protein Properties Length: 279aa    MW: 30763.7 Da    PI: 7.4415
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678318612genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.12e-3346100155
    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                k+rlrWt+eLHe+Fv+av+qLGG+++AtPk +l++m+++gLt++hvkSHLQkYRl
  678318612  46 KQRLRWTHELHEQFVDAVAQLGGPDRATPKGVLRIMGIQGLTIYHVKSHLQKYRL 100
                79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.47243103IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.4E-3145101IPR009057Homeodomain-like
SuperFamilySSF466891.29E-1745100IPR009057Homeodomain-like
TIGRFAMsTIGR015575.2E-2546101IPR006447Myb domain, plants
PfamPF002491.8E-94899IPR001005SANT/Myb domain
PfamPF143792.8E-23132178IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MYQPKAVPSV NTSPVIIHQP LNCGSSIMDP TIGGNGGNNS SNLASKQRLR WTHELHEQFV  60
DAVAQLGGPD RATPKGVLRI MGIQGLTIYH VKSHLQKYRL AKYLPDPSAD GQKAEKKEPG  120
DVLSMLDSSS GMQISEALKL QMEVQRRLHE QLEVQRQLQL RIEAQGKYLK KIIEEQQRLS  180
GVLSESPASG SSMAGLDPEK THPTTPVPTS ESPFLENPEK EHALGHDESF SSQHQLPTCD  240
SNHQADTPAA RLVKRQRMIN DSSFAKQSIE PSLNPPHPL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A8e-2446103158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B8e-2446103158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C8e-2446103158Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D8e-2446103158Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-2446103259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap678318612
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020554068.11e-122uncharacterized protein LOC105175200
SwissprotQ9SJW02e-97PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2G9GE951e-125A0A2G9GE95_9LAMI; Uncharacterized protein
STRINGVIT_00s0475g00040.t011e-121(Vitis vinifera)
STRINGEOY290601e-121(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA27962451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-82G2-like family protein