PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

678318686

Organism

Utricularia gibba

Taxonomic ID

13748

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia

Family

NAC

Protein Properties

Length: 147aa MW: 15731.5 Da PI: 10.0436

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
678318686	genome	UGSP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	35.3	3.4e-11	21	50	1	30
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel 30 l+pGfrFhPtdeelv +yLk+kv gk+++ 678318686 21 LAPGFRFHPTDEELVRYYLKRKVCGKDHSK 50 579*********************999554 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-10	14	49	IPR003441	NAC domain
PROSITE profile	PS51005	9.766	21	147	IPR003441	NAC domain
Pfam	PF02365	1.3E-8	23	54	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence Send to blast
MGISTAAVEK KSRSSVSSSM LAPGFRFHPT DEELVRYYLK RKVCGKDHSK ELDDSSSWSK 60 AKLSGMGKKE DASDGSVAGR SSSKEKKPSD AWGMKPAVAD GWRVGGSSGK KEKPSDAWGS 120 KSDAADCWGP GGSSRKEEKP SDAWKQA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	678318686

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	3e-13	NAC domain containing protein 2