PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678319698
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family CAMTA
Protein Properties Length: 908aa    MW: 100724 Da    PI: 5.3528
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678319698genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-150.83.2e-16478974116
       CG-1  74 KvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116
                +vg+ e+l+cyYa++++np+f+rr+yw+L+ ++++ivlvhy+e
  678319698  47 QVGNAEALNCYYAQGDQNPNFKRRSYWMLDPAYDHIVLVHYRE 89 
                5999*************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143723.834196IPR005559CG-1 DNA-binding domain
SMARTSM010763.5E-51791IPR005559CG-1 DNA-binding domain
PfamPF038592.5E-134789IPR005559CG-1 DNA-binding domain
SuperFamilySSF812968.54E-16333416IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.108.8E-5333404IPR013783Immunoglobulin-like fold
Gene3DG3DSA:1.25.40.204.1E-16518613IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122520612IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.8E-16521614IPR020683Ankyrin repeat-containing domain
CDDcd002041.16E-13525612No hitNo description
PfamPF127963.2E-6526613IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0047553582IPR002110Ankyrin repeat
PROSITE profilePS5008810.713553585IPR002110Ankyrin repeat
SMARTSM0001515670692IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.492671700IPR000048IQ motif, EF-hand binding site
SMARTSM000158.9731753IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.236732761IPR000048IQ motif, EF-hand binding site
PfamPF006120.24735752IPR000048IQ motif, EF-hand binding site
SMARTSM000150.013754776IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.791755780IPR000048IQ motif, EF-hand binding site
PfamPF006126.8E-4757776IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    Send to blast
PLVNFHCSSF VVRGVEYFTD SIIFKGAGGF SSTITSSCEF SALLWNQVGN AEALNCYYAQ  60
GDQNPNFKRR SYWMLDPAYD HIVLVHYREE SESRVDAGPT SVLSGYSSDA YQHEPSSAYD  120
ESYALYNNES SPGSMEISSS QIQMNIGVSQ LDARNITDEA TGSSSLEFDR ALRKLQRDLS  180
LDDEREETYE FCSNNEDSYG IQYSQGNPLC QQIGISLSLF FLFFPSSQVN LCTIMVGVMD  240
NLETLMALHL FAEHYHAPEH TVNKKMPNSL TDSHAEFLPH FEGTSLAANH ICPSQQLAYG  300
TNSLGTSALF SDNIFQNSPE NSTSSSNTLK KFTVHEISPD WCYHSEGAKV IIVGSFLSHP  360
LDGVWGCMFG ETEVPVLLIQ EGVFCCHAPP HLHGIVDICV TWNHECCSEV RKFEFRTKPS  420
AYAHSNSEAE AKSLDELLLL VKLVQMLRGG VSVAAVESNN NSESSQEIFT DVINSIWDGS  480
LNSLTTLDWI VQELLKDKLA WWLSSKSSLG SNEGCPLSKE EQGMLHVIAG LGFEWALQPL  540
LKSGVGVNFR DASGWTALHW AAKFGREKMV TALIASGASA GLLTDPNTQD PVGQTPGSIA  600
FAYGHTALAG YLSEVALTSH LSSLTFEECV ESKDLAAEEA ERTVSMVAGA SSSAYDDKDS  660
LYHSLAAVRN AAQSAARIQA AFRAHSFRKR QHRATTSLYS GGNGDEYSIL ESDLPCFPTA  720
SKSGAYRNTY EHQLAAVSIQ KKYKGWKGRK DFIALRQKVI KIQAHARGYA VRKKYKVCWA  780
VGILDKAILR WRRHRSGLRG FKNDTPCENE EDDEDILKEF RKTKVEVEID KAVSRVLSMV  840
RSPRARQQYH RIIKDHIQSK LELENTEYDA VFSSHLSEIS SSLGIPLVED FPDYLVSEPD  900
DFIALDSC
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap678319698
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086818.10.0calmodulin-binding transcription activator 4
SwissprotQ9FYG21e-165CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A2G9H1X50.0A0A2G9H1X5_9LAMI; Uncharacterized protein
STRINGMigut.E00009.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA39322037
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.11e-137Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]